金沢大学遺伝子研究施設西内研究室

Publication

2020

Hashimoto T, Mustafa G, Nishiuchi T, Komatsu S. (2020)
Comparative Analysis of the Effect of Inorganic and Organic Chemicals with Silver Nanoparticles on Soybean under Flooding Stress.
Int J Mol Sci. 21: E1300. （査読有）
Asano T, Nguyen HT, Yasuda M, Sidiq Y, Nishimura K, Nakashita H, Nishiuchi T. (2020)
The Arabidopsis MAPKKK δ-1 is required for full immunity against bacterial and fungal infection.
J Exp Bot. in press. （査読有）
Naruse C, Abe K, Yoshihara T, Kato T, Nishiuchi T, Asano M. (2020)
Heterochromatin protein 1γ deficiency decreases histone H3K27 methylation in mouse neurosphere neuronal genes.
FASEB J. in press. （査読有）
T. Tanaka, N. Tanaka, Y. Nagano, H. Kanuka, D. Yamamoto, N. Yamamoto, E. Nanba and T. Nishiuchi. (2020)
Efforts to enhance safety measures for CRISPR/Cas-based Gene Drive Technology in Japan.
Journal of Environment and Safety. in press （査読有）
Kazuyuki Maeda, Yuya Tanaka, Momoko Matsuyama, Masayuki Sato, Kazuki Sadamatsu, Tamotsu Suzuki, Kosuke Matsui, Yuichi Nakajima, Takeshi Tokai, Kyoko Kanamaru, Shuichi Ohsato, Tetsuo Kobayashi, Makoto Fujimura, Takumi Nishiuchi, Naoko Takahashi-Ando, Makoto Kimura (2020)
Substrate specificities of Fusarium biosynthetic enzymes explain the genetic basis of a mixed chemotype producing both deoxynivalenol and nivalenol-type trichothecenes,
International Journal of Food Microbiology, 320:108532 （査読有）

2019

Li F, Kitajima S, Kohno S, Yoshida A, Tange S, Sasaki S, Okada N, Nishimoto Y, Muranaka H, Nagatani N, Suzuki M, Masuda S, Thai TC, Nishiuchi T, Tanaka T, Barbie DA, Mukaida N, Takahashi C. (2019)
Retinoblastoma Inactivation Induces a Protumoral Microenvironment via Enhanced CCL2.
Cancer Res. 79(15):3903-3915. （査読有）
Ikegame M, Hattori A, Tabata MJ, Kitamura KI, Tabuchi Y, Furusawa Y, Maruyama Y, Yamamoto T, Sekiguchi T, Matsuoka R, Hanmoto T, Ikari T, Endo M, Omori K, Nakano M, Yashima S, Ejiri S, Taya T, Nakashima H, Shimizu N, Nakamura M, Kondo T, Hayakawa K, Takasaki I, Kaminishi A, Akatsuka R, Sasayama Y, Nishiuchi T, Nara M, Iseki H, Chowdhury VS, Wada S, Ijiri K, Takeuchi T, Suzuki T, Ando H, Matsuda K, Somei M, Mishima H, Mikuni-Takagaki Y, Funahashi H, Takahashi A, Watanabe Y, Maeda M, Uchida H, Hayashi A, Kambegawa A, Seki A, Yano S, Shimazu T, Suzuki H, Hirayama J, Suzuki N.
Melatonin is a potential drug for the prevention of bone loss during space flight.
J Pineal Res. 2019 Oct;67(3):e12594. doi: 10.1111/jpi.12594. Epub 2019 Jul 19.
Fukada F, Kodama S, Nishiuchi T, Kajikawa N, and KuboY. (2019)
Plant pathogenic fungi Colletotrichum and Magnaporthe share a common G1 phase monitoring strategy for proper appressorium development.
New Phytologist 222:1909-1923.（査読有）
Kodama S, Nishiuchi T, Kubo Y. (2019)
Colletotrichum orbiculare MTF4 is a key transcription factor downstream of MOR essential for plant signal-dependent appressorium development and pathogenesis.
Mol. Plant-Microbe Interact. 32:313-324. （査読有）
Shiobara T, Nakajima Y, Maeda K, Akasaka M, Kitou Y, Kanamaru K, Ohsato S, Kobayashi T, Nishiuchi T, Kimura M (2019)
Identification of amino acids negatively affecting Fusarium trichothecene biosynthesis by frequent pH adjustments of the liquid culture medium.
Antonie Van Leeuwenhoek. 112:471-478.（査読有）
Wenyu Miao, Katsuya Sakai, Naoya Ozawa, Takumi Nishiuchi, Yoshinori Suzuki, Kenichiro Ito, Tomomi Morioka, Masataka Umitsu, Junichi Takagi, Hiroaki Suga, and Kunio Matsumoto (2019)
Cellular signaling and gene expression profiles evoked by a bivalent macrocyclic peptide that serves as an artificial MET receptor agonist.
Sci. Rep 7:16492.（査読有）
Sakamoto T, Hashimoto A, Yamada M, Wada N, Yoshida T, Inoue-Sakamoto K, Nishiuchi T, Matsugo S. (2019)
Four chemotypes of the terrestrial cyanobacterium Nostoc commune characterized by differences in the mycosporine-like amino acids.
Phycological Research. 67:3-11（査読有）

2018

Kodama S, Nishiuchi T. Kubo Y. (2018)
Colletotrichum orbiculare MTF4 is a key transcription factor downstream of MOR essential for plant signal-dependent appressorium development and pathogenesis.
Mol. Plant-Microbe Interact. 32:313-324.
Takuya Shiobara, Yuichi Nakajima, Kazuyuki Maeda, Manami Akasaka, Yoshiyuki Kitou, Kyoko Kanamaru, Shuichi Ohsato, Tetsuo Kobayashi, Takumi Nishiuchi, Makoto Kimura (2018)
Identification of amino acids negatively affecting Fusarium trichothecene biosynthesis by frequent pH adjustments of the liquid culture medium.
Antonie Van Leeuwenhoek. 112:471-478.
Wenyu Miao, Katsuya Sakai, Naoya Ozawa, Takumi Nishiuchi, Yoshinori Suzuki, Kenichiro Ito, Tomomi Morioka, Masataka Umitsu, Junichi Takagi, Hiroaki Suga, and Kunio Matsumoto (2018)
Cellular signaling and gene expression profiles evoked by a bivalent macrocyclic peptide that serves as an artificial MET receptor agonist.
Sci. Rep. 7:16492.
Zhao J, Okamoto Y, Asano Y, Ishimaru K, Aki S, Yoshioka K, Takuwa N, Wada T, Inagaki Y, Takahashi C, Nishiuchi T. Takuwa Y. (2018)
Sphingosine-1-phosphate receptor-2 facilitates pulmonary fibrosis through potentiating IL-13 pathway in macrophages.
PLoS One 13(5):e0197604.
Fitri Y, Kato T, Nishiuchi T. (2018)
The possible roles of AtERF71 in the defense response against the Fusarium graminearum.
Plant Biotech. 35:187-192
Inoue-Sakamoto K, Nazifi E, Tsuji C, Asano T, Nishiuchi T. Matsugo S, Ishihara K, Kanesaki Y, Yoshikawa H, Sakamoto T. (2018)
Characterization of mycosporine-like amino acids in the cyanobacterium Nostoc verrucosum.
J Gen Appl Microbiol. 64:203-211.
Maeda K, Ichikawa H, Nakajima Y, Motoyama T, Ohsato S, Kanamaru K, Kobayashi T, Nishiuchi T. Osada H, Kimura M. (2018)
Identification and Characterization of Small Molecule Compounds That Modulate Trichothecene Production by Fusarium graminearum.
ACS Chem Biol. 13: 1260-1269.
Takarada-Iemata M, Yoshikawa A, Ta HM, Okitani N, Nishiuchi T. Aida Y, Kamide T, Hattori T, Ishii H, Tamatani T, Le TM, Roboon J, Kitao Y, Matsuyama T, Nakada M, Hori O. (2018)
N-myc downstream-regulated gene 2 protects blood-brain barrier integrity following cerebral ischemia.
Glia. 66: 1432-1446.
Ninik Nihayatul Wahibah, Tomokazu Tsutsui, Daisuke Tamaoki, Kazuhiro Sato, Takumi Nishiuchi. (2018)
Expression of Barley Glutathione S-Transferase13 Gene Reduces Accumulation of Reactive Oxygen Species by Trichothecenes and Paraquat in Arabidopsis Plants.
Plant Biotech. 35:71-79.
Kobayashi F, Nishiuchi T. Takaki K, Konno H. (2018)
Ubiquitin chain specificities of E6AP E3 ligase and its HECT domain.
Biochem Biophys Res Commun. 496:686-692.
Inoue-Sakamoto K, Tanji Y, Yamaba M, Natsume T, Masaura T, Asano T, Nishiuchi T. Sakamoto T. (2018)
Characterization of extracellular matrix components from the desiccation-tolerant cyanobacterium Nostoc commune.
J Gen Appl Microbiol. 64:15-25.
Tomiyama R, Takakura K, Takatou S, Le TM, Nishiuchi T. Nakamura Y, Konishi T, Matsugo S, Hori O. (2018)
3,4-dihydroxybenzalacetone and caffeic acid phenethyl ester induce preconditioning ER stress and autophagy in SH-SY5Y cells.
J Cell Physiol. 232: 1671-1684.

2017

Miwa A, Sawada Y, Tamaoki D, Hirai M, Kimura M, Sato K, Nishiuchi T. (2017)
Nicotinamide mononucleotide and related metabolites induce the disease resistance against the fungal phytopathogen in Arabidopsis and barley.
Sci. Rep. 7:6389
Kitajima S, Yoshida A, Kohno S, Li F, Suzuki S, Nagatani N, Nishimoto Y, Sasaki N, Muranaka H, Wan Y, Thai TC, Okahashi N, Matsuda F, Shimizu H, Nishiuchi T. Suzuki Y, Tominaga K, Gotoh N, Suzuki M, Ewen ME, Barbie DA, Hirose O, Tanaka T, Takahashi C. (2017)
The RB-IL-6 axis controls self-renewal and endocrine therapy resistance by fine-tuning mitochondrial activity.
Oncogene. 36:5145-5157.
Naruse C, Shibata S, Tamura M, Kawaguchi T, Abe K, Sugihara K, Kato T, Nishiuchi T. Wakana S, Ikawa M, Asano M. (2017)
New insights into the role of Jmjd3 and Utx in axial skeletal formation in mice.
FASEB J. 31:2252-2266.
Nakata H, Yamamoto M, Kumchantuek T, Adhapanyawanich K, Nishiuchi T. Iseki S. (2017)
Synthesis, localization and possible function of serine (or cysteine) peptidase inhibitor, clade B, member 6a (Serpinb6a) in mouse submandibular gland.
Cell Tissue Res. 369, 513–526.
Maeda K, Nakajima Y, Tanahashi Y, Kitou Y, Miwa A, Kanamaru K, Kobayashi T, Nishiuchi T. Kimura M. (2017)
L-Threonine and its analogue added to autoclaved solid medium suppress trichothecene production by Fusarium graminearum.
Arch Microbiol. 199: 945-952.
Maeda K, Nakajima Y, Motoyama T, Kondoh Y, Kawamura T, Kanamaru K, Ohsato S, Nishiuchi T. Yoshida M, Osada H, Kobayashi T, Kimura M. (2017)
Identification of a trichothecene production inhibitor by chemical array and library screening using trichodiene synthase as a target protein.
Pestic Biochem Physiol. 138:1-7
Yoshida A, Kitajima S, Li F, Cheng C, Takegami Y, Kohno S, Wan YS, Hayashi N, Muranaka H, Nishimoto Y, Nagatani N, Nishiuchi T. Thai TC, Suzuki S, Nakao S, Tanaka T, Hirose O, Barbie DA, Takahashi C. (2107)
MicroRNA-140 mediates RB tumor suppressor function to control stem cell-like activity through interleukin-6.
Oncotarget. 8:13872-13885
Kodama S, Ishizuka J, Miyashita I, Ishii T, Nishiuchi T. Miyoshi H, Kubo Y. (2017)
The morphogenesis-related NDR kinase pathway of Colletotrichum orbiculare is required for translating plant surface signals into infection-related morphogenesis and pathogenesis.
PLoS Pathog. 13:e1006189.
Fukunaga S, Sogame M, Hata M, Singkaravanit-Ogawa S, Piślewska-Bednarek M, Onozawa-Komori Ma, Nishiuchi T. Hiruma K, Saitoh H, Terauchi R, Kitakura S, Inoue Y, Bednarek P, Schulze-Lefert P, Takano Y. (2017)
Dysfunction of Arabidopsis MACPF domain protein activates programmed cell death via tryptophan metabolism in MAMP-triggered immunity.
The Plant J. 89:381-393.

2016

Nakata H, Wakayama T, Asano T, Nishiuchi T. Iseki S. (2016)
Identification of sperm equatorial segment protein 1 in the acrosome as the primary binding target of peanut agglutinin (PNA) in the mouse testis.
Histochem Cell Biol. 147:27-38
Adachi E, Sakai K, Nishiuchi T. Imamura R, Sato H, Matsumoto K. (2016)
Different growth and metastatic phenotypes associated with a cell-intrinsic change of Met in metastatic melanoma.
Oncotarget. 7(43):70779-70793
Ezaki B, Higashi A, Nanba N, Nishiuchi T. (2016)
An S-adenosyl Methionine Synthetase (SAMS) Gene from Andropogon virginicus L. Confers Aluminum Stress Tolerance and Facilitates Epigenetic Gene Regulation in Arabidopsis thaliana.
Front Plant Sci. 8:1627.
Harata K, Nishiuchi T. Kubo Y. (2016)
Colletotrichum orbiculare WHI2, a Yeast Stress-Response Regulator Homolog, Controls the Biotrophic Stage of Hemibiotrophic Infection Through TOR Signaling.
Mol Plant Microbe Interact. 29:468-483.
Maeda K, Nakajima Y, Tanahashi Y, Kosaki T, Kitou Y, Kanamaru K, Kobayashi T, Nishiuchi T. Kimura M. (2016)
Characterization of the acivicin effects on trichothecene production by Fusarium graminearum species complex.
J Gen Appl Microbiol. 62:272-276.
Maeda K, Tanaka A, Sugiura R, Koshino H, Tokai T, Sato M, Nakajima Y, Tanahashi Y, Kanamaru K, Kobayashi T, Nishiuchi T. Fujimura M, Takahashi-Ando N, Kimura M. (2016)
Hydroxylations of trichothecene rings in the biosynthesis of Fusarium trichothecenes: evolution of alternative pathways in the nivalenol chemotype.
Environ Microbiol. 18:3798-3811
Maida, Y., Takakura, M., Nishiuchi, T., Yoshimoto, T., and Kyo, S. (2016)
Exosomal transfer of functional small RNAs mediates cancer-stroma communication in human endometrium.
Cancer Med. 5: 304-314
Kitou, Y., Nakajima, Y., Maeda, K., Jin, Q., Nishiuchi, T., Kanamaru, K., Kobayashi, T., and Kimura, M. (2016)
Re-examination of genetic and nutritional factors related to trichothecene biosynthesis in Fusarium graminearum.
Biosci. Biotech. and Biochem. 28:1-4.

2015

Salah M, Nishimoto Y, Kohno S, Kondoh A, Kitajima S, Muranaka H, Nishiuchi T. Ibrahim A, Yoshida A, Takahashi C. (2015)
An in vitro system to characterize prostate cancer progression identified signaling required for self-renewal.
Mol Carcinog. 55:1974-1989
Sato, M., Nishiuchi, T. and Sakamoto, T. (2015)
Responses to intermittent exposure to green light during the dark period in Arabidopsis thaliana and possible involvement of cryptochrome 2.
Plant Biotech. 3: 263-266.
Nakajima, Y., Koseki, N., Sugiura, R., Tominaga, N., Maeda, K., Tokai, T., Izawa, M., Kanamaru, K., Kamakura, T., Kobayashi, T., Nishiuchi, T., Yoshida, M., and Kimura, M. (2015)
Effect of disrupting the trichothecene efflux pump encoded by FgTri12 in the nivalenol chemotype of Fusarium graminearum.
The Journal of General and Applied Microbiology 61:93-96.
Rahman, M., Rahman, A., Maki, T., Nishiuchi, T., Asano, T., and Hasegawa, H. (2015)(2015)
A marine phytoplankton Prymnesium parvum upregulates the component proteins of photosystem II under iron stress.
Photosynthetica. 53. 136-143.
Nazifi E, Wada N, Asano T, Nishiuchi T. Iwamuro Y, Chinaka S, Matsugo S, Sakamoto T. (2015)
Characterization of the chemical diversity of glycosylated mycosporine-like amino acids in the terrestrial cyanobacterium Nostoc commune.
J. Photochem. Photobiol. B. 142:154-68.
Adthapanyawanich K, Kumchantuek T, Nakata H, Yamamoto M, Wakayama T, Nishiuchi T. Iseki S. (2015)
Morphology and gene expression profile of the submandibular gland of androgen-receptor-deficient mice.
Arch Oral Biol. 60: 320-332.

2014

Maeda, K., Nakajima, Y., Motoyama, T., Kitou, Y., Kosaki, T., Saito, T., Nishiuchi, T., Kanamaru, K., Osada, H., Kobayashi, T. and Kimura, M. (2014)
Effects of acivicin on growth, mycotoxin production and virulence of phytopathogenic fungi.
Letters in Applied Microbiol. 59:377-383.
Tamaoki, D., Karahara, I., Nishiuchi, T., Wakasugi, T., Yamada, K. and Kamisaka, S. (2014)
Effects of hypergravity stimulus on global gene expression during reproductive growth in Arabidopsis.
Plant Biology. 16:179-186.

2013

Asano, T., Miwa, A., Maeda, K., Kimura, M. and Nishiuchi, T. (2013)
The secreted antifungal protein Thionin 2.4 in Arabidopsis thaliana suppresses the toxicity of afungal fruit body lectin from Fusarium graminearum.
PLoS Pathogens. 9:e1003581.
Fujita N., Nagata, Y., Nishiuchi, T., Sato, M., Iwami, M. and Kiya, T. (2013)
Visualization of neural activity in insect brains using a conserved immediate early gene, Hr38.
Current Biology. 23:2063-2070.
Shamma, A., Hayashi, N., Kobayashi, M., Sasaki, N., Nishiuchi, T., Doki, Y., Okamoto, T., Kitajima, S., Kohno, S., Muranaka, H., Yamamoto, K.-I. and Takahashi, C. (2013)
ATM mediates pRB function to control DNMT1 protein stability and DNA methylation.
Molecular and Cellular Biology. 33:3113-3124.
Tokai, T., Nakajima, Y., Ishikawa, H., Maeda, K., Nishiuchi, T., Kobayashi, T., and Kimura, M. (2013)
A promoter of Fusarium graminearum Tri4 does not function when placed at the end of the trichothecene gene cluster.
Mycotoxins. 63:17-25.
Rahman, M., Rahman, A., Maki, T., Nishiuchi, T., Asano, T., and Hasegawa, H. (2013)
A marine phytoplankton (Prymnesium parvum) up-regulates ABC transporters and several other proteins to acclimatize with Fe-limitation.
Chemosphere 95:213-219.
Nazifi, E., Wada, N., Yamaba, M., Asano, T., Nishiuchi, T., Matsugo, S. and Sakamoto, T. (2013)
Glycylatedos porphyra-334 and mycosporine-threonine: novel mycosporine-like amino acids from the terrestrial cyanobacterium Nostoc commune.
Marine Drugs. 11:3124-3154.
Saruyama, N., Asano, T., Nishiuchi, T., Sasamoto, H., and Kodama, H.(2013)
Quantification of metabolic activity of cultured plant cells by vital staining with fluorescein diacetate.
Anal. Biochem. 441:58-62.
Kitamura, K., Takahira, K., Inari, M., Satoh, Y., Hayakawa, K., Yoshiaki Tabuchi, Y., Ohgai, K., Nishiuchi, T., Kondo, T., Mikuni-Takagaki, Y., Chen, W., Hattori, A., and Suzuki, N. (2013)
Zebrafish scales respond differently to in vitro dynamic and static acceleration: analysis of interaction between osteoblasts and osteoclasts.
Comparative Biochem and Physiol Part A: Mol Integrative Physiol. 166:74-80.
Miyamoto H, Shimada E, Satoh T, Tanaka R, Oshima K, Suda W, Fukuda S, Nishiuchi T. Matsuura M, Mori K, Miyamoto H, Ohno H, Hattori M, Kodama H, Matsushita T. (2013)
Thermophile-fermented compost as a possible scavenging feed additive to prevent peroxidation.
J Biosci Bioeng. 116:203-208.

Before 2012

Komatsubara AT, Asano T, Tsumoto H, Shimizu K, Nishiuchi T. Yoshizumi M, Ozawa K. (2012)
Proteomic analysis of S-nitrosylation induced by 1-methyl-4-phenylpyridinium (MPP+).
Proteome Sci. 29: 74.
Asano, T., Kimura, M., and Nishiuchi T. (2012)
The defense response in Arabidopsis thaliana against Fusarium sporotrichioides.
Proteome Science. 10:61.
Omori, K., Wada, S., Maruyama, .Y, Hattori, A., Kitamura, K., Sato, Y., Nara, M., Funahashi, H., Yachiguchi, K., Hayakawa, K., Endo, M., Kusakari, R, Yano, S., Srivastav, A.K., Kusui, T., Ejiri, S., Chen, W., Tabuchi, Y., Furusawa, Y., Kondo, T., Sasayama, Y., Nishiuchi, T., Nakano, M., Sakamoto, T., Suzuki, N. (2012)
Prostaglandin E increases both osteoblastic and osteoclastic activity in the scales and participates in calcium metabolism in goldfish.
Zoolog. Sci. 29:499-504
Satoh T, Nishiuchi T. Naito T, Matsushita T, Kodama H, Miyamoto H, Miyamoto H. (2012)
Impact of oral administration of compost extract on gene expression in the rat gastrointestinal tract.
J. Biosci. Bioeng. 114: 500-505.
Nakata, H., Wakayama, T., Adthapanyawanich1, K., Nishiuchi, T., Murakami, Y., Takai, Y., and Iseki, S. (2012)
Compensatory up-regulation of myelin protein zero-like 2 expression in 1 spermatogenic cells in cell adhesion molecule-1-deficient mice.
Acta Histochemica et Cytochemica. 45:47-55.
Koga, H., Doi, K., Nishiuchi, T., Kato, T., Mori, M., and Komatsu, S. (2012)
Proteomic analysis of basic resistance of susceptible line and major gene resistance of resistant near-isogenic line of rice (Piz-t) plants against infection of Magnaporthe oryzae.
Physiol. and Mol. Plant Pathol. 77:60-66.
Kawaguchi, Y., Nishiuchi,T., Kodama, H., Nakano, T., Nishimura, K., Shimamura, K., Yamaguchi, K., Kuchitsu, K., Shinshi, H., and Suzuki, K. (2012)
A fungal elicitor-induced retardation and its restoration of root growth of tobacco seedlings.
Plant Growth Regul. 66:59-68.
Tamaoki, D., Karahara, I., Nishiuchi, T., Wakasugi, T., Yamada, K., and Kamisaka, S. (2011)
Involvement of auxin dynamics in hypergravity-induced promotion of lignin-related genes expression in Arabidopsis inflorescence stems.
J. Exp. Bot. 62:5463-5469.
Abe, K., Naruse, C., Kato, T., Nishiuchi, T., Saitou, M., and Asano, M. (2011)
Reduced number of primordial germ cells caused by impaired cell cycle progression in heterochromatin protein 1γ–deficient mice.
Biol. Reprod. 85: 1013-1024.
Hiruma, K., Nishiuchi T., Kato, T., Bednarek, P., Schulze-Lefert, P., Okuno, T., and Takano, Y. (2011)
Arabidopsis ENHANCED DISEASE RESISTANCE 1 is required for pathogen-induced expression of plant defensins in nonhost resistance and acts through interference of MYC2-mediated repressor function.
Plant J. 67: 980-992.
Motani, K., Kushiyama, H., Imamura, R., Kinoshita, T., Nishiuchi, T., and Suda T. (2011)
Caspase-1 with a long half-life induces ASC-mediated necrosis independent of its catalytic activity.
J. Biol. Chem. 286: 33963-33972.
Katayama, N., Kato, M., Nishiuchi, T., and Yamada, T. (2011)
Comparative Anatomy of Embryogenesis in three species of Podostemaceae with Implications for Evolution of the Loss of Embryonic Shoot and Root Meristems.
Evol. Dev. 13: 333-342.
Sogabe, Y., Nakamura, H., Nakagawa, T., Hasegawa, S., Asano, T., Ohta, H., Yamaguchi, K., Mueller, M.J., Kodama, H., and Nishiuchi, T. (2011)
Visualization of Wounding-Induced Root-to-Shoot Communication in Arabidopsis thaliana.
Plant Signaling & Behavior. 6: 1037-1039.
Hasegawa, S., Sogabe, Y, Asano, T., Nakamura, H., Kodama, H., Ohta, H., Yamaguchi, K., Mueller, M.J., and Nishiuchi, T. (2011)
Gene Expression Analysis of Wounding-Induced Root-to-Shoot Communication in Arabidopsis thaliana.
Plant, Cell & Environment 34; 705-716.
Tanaka, S., Ichikawa, A, Yamada, K., Tsuji, G., Nishiuchi, T., Mori, M., Koga, H., Nishizawa, Y., Richard, O.C. and Kubo, Y. (2010)
HvCEBiP, a gene homologous to rice chitin receptor CEBiP, contributes to basal resistance of barley to Magnaporthe oryzae.
BMC Plant Biology., 10:288
Hasegawa, M., Imamura, R., Motani, K., Nishiuchi, T., Matsumoto, N., Kinoshita, T., Suda, T. (2009)
Mechanism and repertoire of ASC-mediated gene expression.
J Immunol. 182: 7655-7662.
Tamaoki, D., Karahara, I., Nishiuchi, T., de Oliveira, S., Schreiber, L., Wakasugi, T., Yamada, K., Yamaguchi, K. Kamisaka, S. (2009)
Transcriptome profiling in Arabidopsis inflorescence stems grown under hypergravity in terms of cell walls and plant hormones.
Advances in Space Research 44: 245-253.
Asano, T., Yasuda, M., Nakashita, H., Kimura, M., Yamaguchi, K. Nishiuchi, T. The AtNFXL1 (2008)
gene functions as a signaling component of the type A trichothecene-dependent response.
Plant Signaling & Behavior 3: 991-992.
Takahashi-Ando, N., Ochiai, N., Tokai, T., Ohsato, S., Nishiuchi, T., Yoshida, M., Fujimura, M., Kimura, M. (2008)
A screening system for inhibitors of trichothecene biosynthesis: hydroxylation of trichodiene as a target.
Biotechnol. Lett. 30: 1055-1059.
Asano, T., Masuda, D., Yasuda, M., Nakashita, H., Kudo, T., Kimura, M., Yamaguchi, K. Nishiuchi, T. (2008)
AtNFXL1, an Arabidopsis homologue of the human transcription factor NF-X1, functions as a negative regulator of the trichothecene phytotoxin-induced defense response.
The Plant J. 53: 450-464.
Ochiai, N., Tokai, T., Nishiuchi, T., Takahashi-Ando, N., Fujimura, M., Kimura, M. (2007)
Involvement of the osmosensor histidine kinase and osmotic stress-activated protein kinases in the regulation of secondary metabolism in Fusarium graminearum. Biochem.
Biophys. Res. Commun. 363: 639-644.
Ogawa, D., Yamaguchi, K., Nishiuchi, T. (2007)
High-level overexpression of the Arabidopsis HsfA2 gene confers not only thermotolerance but also salt/osmotic stress tolerance and enhanced callus growth.
J. Exp. Bot. 58: 3373-3383.
Masuda, D., Yamaguchi, K., Kimura, M., Yamaguchi, I., and Nishiuchi, T. (2007)
Phytotoxic effects of trichothecenes on the growth and morphology of Arabidopsis thaliana.
J. Exp. Bot. 58: 1617-1626.
Suzuki, K., Yano, A., Nishiuchi, T., Nakano, A., Kodama, H., Yamaguchi, K., and Shinshi, H. (2007)
Isolation and analysis of elicitor-induced genes in tobacco plants by subtractive PCR and cDNA macroarray.
Plant Science. 173: 291-301.
Tsuji, S., Ueda, K., Nishiyama, T., Hasebe, M., Yoshikawa, S., Konagaya, A., Nishiuchi, T., and Yamaguchi, K. (2007)
The chloroplast genome from a lycophyte (microphyllophyte), Selaginella uncinata, has a unique inversion, transpositions and many gene losses.
J. Plant Res. 120: 281-290.
Ohsato, S., Ochiai-Fukuda, T., Nishiuchi, T., Takahashi-Ando, N., Koizumi, S., Hamamoto, H., Kudo, T., Shinozaki, K., Yamaguchi, I., and Kimura, M. (2007)
Transgenic inactivation of the Fusarium mycotoxin deoxynivalenol in rice plants as a model of cereal crops.
Plant Cell Report. 26: 531-538.
Nakano, A., Nishiuchi, T., Suzuki, K., Fujimura, T., Shinshi, H. (2006)
Studies on transcriptional regulation of endogenous genes by ERF2 transcription factor in tobacco cells.
Plant Cell Physiol. 47: 554-558.
Nishiuchi, T., Masuda, D., Ichimura, K., Shinozaki, K., Nakashita, H., Yoshida, S., Kimura, M., Yamaguchi, I., Yamaguchi, K. (2006)
Fusarium phytotoxin trichothecenes have an elicitor-like activity in Arabidopsis thaliana, but its activity differed significantly among their molecular species.
Molecular Plant-Microbe Interaction. 19: 512-520.
Suzuki, K., Nishiuchi, T., Itoh, M., Shinshi, H. (2006)
Elicitor-induced down-regulation of cell cycle-related genes in tobacco cells.
Plant Cell Environment. 29: 183-191.
Shimanuki, K., Shimamura, K., Hirai, S., Nishiuchi, T., Suzuki, K., Kodama, H. (2005)
Polyethylene glycol-mediated enhancement of the hybridization rate on cDNA microarray.
Analytical Biochemistry. 344: 284-286.
Nishiuchi, T., Shinshi, H., and Suzuki, K. (2004)
Rapid and transient activation of transcription of the ERF3 gene by wounding in tobacco leaves: possible involvement of NtWRKYs and autorepression.
J. Biol. Chem. 279: 55355-55361.
Higa, A., Kimura, M., Mimori, K., Ochiai-Fukuda, T., Tokai, T., Takahashi-Ando, N., Nishiuchi, T., Igawa, T., Fujimura, M., Hamamoto, H., Usami, R., and Yamaguchi, I. (2003)
Expression in Cereal Plants of Genes That Inactivate Fusarium Mycotoxins.
Biosci. Biotechnol Biochem. 67: 914-918.
Nishiuchi, T., Suzuki, K., Kitajima, S., Sato, F., and Shinshi, H. (2002)
Involvement of transcriptional activation in rapid induction of genes for ERFs by wounding and cycloheximide in Tobacco Plant tissues.
Plant Mol. Biol. 49: 473-482.
Kodama, H., Nishiuchi, T., Seo, S., Ohashi, Y., and Iba, K. (2000)
Possible involvement of protein phosphorylation in the wound-responsive expression of Arabidopsis plastid ω-3 fatty acid desaturase gene.
Plant Science 155: 153-160.
Nishiuchi, T., Kodama, H., Yanagisawa, S., and Iba, K. (1999)
Wound-induced expression of the FAD7 gene is mediated by different regulatory domains of its promoter in leaves/stems and roots.
Plant Physiol. 121: 1239-1246.
Nishiuchi, T., Hamada, T., Kodama, H., and Iba, K. (1997)
Wounding changes the spatial expression pattern of the Arabidopsis plastid ω-3 fatty acid desaturase gene (FAD7) through different signal transduction pathways.
Plant Cell 9: 1701-1712.
Hamada, T., Nishiuchi, T., Kodama, H., Nishimura, M., and Iba, K. (1996)
cDNA cloning of a wounding-inducible gene encoding a plastid ω-3 fatty acid desaturase from tobacco.
Plant Cell Physiol. 37: 606-611.
Nishiuchi, T., Nakamura, T., Abe, T., Kodama, H., Nishimura, M., and Iba, K. (1995)
Tissue-specific and light-responsive regulation of the promoter region of the Arabidopsis thaliana chloroplast ω-3 fatty acid desaturase gene (FAD7).
Plant Mol. Biol. 29: 599-609.
Kodama, H., Horiguchi, G., Nishiuchi, T., Nishimura, M., and Iba, K. (1995)
Fatty acid desaturation during chilling acclimation is one of the factors involved in conferring low-temperature tolerance to young tobacco leaves.
Plant Physiol. 107:1177-1185.
Nishiuchi, T., Nishimura, M., Arondel, V., and Iba, K. (1994)
Genomic nucleotide sequence of a gene encoding a microsomal ω-3 fatty acid desaturase from Arabidopsis thaliana.
Plant Physiol. 105: 767- 768.
Iba, K., Gibson, S., Nishiuchi, T., Fuse, T., Nishimura, M., Arondel, V., Hugly, S., and Somerville, C. (1993)
A gene encoding a chloroplast ω-3 fatty acid desaturase complements alterations in fatty acid desaturation and chloroplast copy number of the fad7 mutant of Arabidopsis thaliana.
J. Biol. Chem. 268: 24099-24105.